B450

Recent Publications

All known publications ...
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http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Breinig, M. ; Lomakin, A. (First author)DKFZ* ; Heidari, E. (First author)DKFZ* ; Ritter, M.DKFZ* ; Rukhovich, G.DKFZ* ; Böse, L. ; Butthof, L. ; Wendler-Link, L. ; Wiethoff, H. ; Poth, T. ; Sahm, F.DKFZ* ; Schirmacher, P. ; Stegle, O.DKFZ* ; Gerstung, M.DKFZ* ; Tschaharganeh, D. F. (Last author)DKFZ*
Integrated in vivo combinatorial functional genomics and spatial transcriptomics of tumours to decode genotype-to-phenotype relationships.
Nature biomedical engineering 10(1), 125-143 (2026) [10.1038/s41551-025-01437-1]2026   BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Skrupskelyte, G. ; Fowler, J. C. ; Dentro, S.DKFZ* ; Winkler, C. ; Abnizova, I. ; Beumer, N. ; Sood, R. ; Quarrell, T. ; King, C. ; Kamarashev, J. ; Guenova, E. ; Gerstung, M.DKFZ* ; Hall, B. A. ; Michalik, L. ; Jones, P. H.
The dynamics of mutational selection in cutaneous squamous carcinogenesis.
Communications biology nn, nn (2026) [10.1038/s42003-025-09406-9]2026   BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Maas, S. L. N. ; Tang, Y. (First author)DKFZ* ; Stutheit-Zhao, E. ; et al
A microenvironment-determined risk continuum refines subtyping in meningioma and reveals determinants of machine learning-based tumor classification.
Nature genetics nn, nn (2026) [10.1038/s41588-025-02475-w]2026   BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Shmatko, A. (First author)DKFZ* ; Jung, A. W. ; Gaurav, K. ; Brunak, S. ; Mortensen, L. H. ; Birney, E. ; Fitzgerald, T. ; Gerstung, M. (Last author)DKFZ*
Learning the natural history of human disease with generative transformers.
Nature 647(8088), 248-256 (2025) [10.1038/s41586-025-09529-3]2025   BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article McLoughlin, M. A. ; Cheloor Kovilakam, S. ; Dunn, W. G. ; Gu, M. ; Tobin, J. ; Pershad, Y. ; Williams, N. ; Leongamornlert, D. ; Dawson, K. ; Bond, L. ; Marando, L. ; Wen, S. ; Wilson, R. ; Valenzano, G. ; Symeonidou, V. ; Rak, J. ; Damaskou, A. ; Gozdecka, M. ; Liu, X. ; Barcena, C. ; Nomdedeu, J. ; Costeas, P. ; Dimitriou, I. D. ; Fiorillo, E. ; Orrù, V. ; de Almeida, J. G. ; McKerrell, T. ; Cullen, M. ; Mohorianu, I. ; Foukaneli, T. ; Warren, A. J. ; Wong, C. ; Follows, G. ; Godfrey, A. L. ; Gudgin, E. ; Cucca, F. ; McKinney, E. ; Baxter, E. J. ; Gerstung, M.DKFZ* ; Mitchell, J. ; Wiseman, D. ; Bick, A. G. ; Fabre, M. ; Quiros, P. M. ; Nangalia, J. ; Kar, S. ; Vassiliou, G. S.
Telomere attrition becomes an instrument for clonal selection in aging hematopoiesis and leukemogenesis.
Nature genetics 57(9), 2215-2225 (2025) [10.1038/s41588-025-02296-x]2025   BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Patel, A. J. (First author)DKFZ* ; Göbel, K.DKFZ* ; Ille, S. ; et al
Prospective, multicenter validation of a platform for rapid molecular profiling of central nervous system tumors.
Nature medicine 31(5), 1567-1577 (2025) [10.1038/s41591-025-03562-5]2025   BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Isebia, K. T. ; de Jong, A. C. ; van Dessel, L. F. ; de Weerd, V. ; Beaufort, C. ; Helmijr, J. ; Nakauma-González, J. A. ; van Riet, J.DKFZ* ; Hamberg, P. ; Vis, D. ; van der Heijden, M. S. ; Beije, N. ; Lolkema, M. P. ; Deger, T. ; Wilting, S. M. ; de Wit, R. ; Jansen, M. P. H. M. ; Martens, J. W. M.
Cell-free DNA aneuploidy score as a dynamic early response marker in prostate cancer.
Molecular oncology 19(10), 2822-2832 (2025) [10.1002/1878-0261.13797]2025   BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Preprint Gerstung, M. (First author)DKFZ* ; Jin, D.DKFZ* ; Shmatko, A.DKFZ* ; Patel, A.DKFZ* ; Rahmanzade, R. ; Banan, R.DKFZ* ; Friedrich, L.DKFZ* ; Sievers, P.DKFZ* ; Hamelmann, S.DKFZ* ; Schrimpf, D.DKFZ* ; Göbel, K. ; Bogumil, H.DKFZ* ; Maas, S. ; Sill, M.DKFZ* ; Hinz, F.DKFZ* ; Suwala, A.DKFZ* ; Keller, F.DKFZ* ; Habel, A.DKFZ* ; Rukhovich, G.DKFZ* ; Rutz, S.DKFZ* ; Alhalabi, O.DKFZ* ; Sturm, D.DKFZ* ; Reuss, D. E. ; Wesseling, P. ; Woehrer, A. ; Heppner, F. ; Herold-Mende, C. ; Krieg, S. ; Wick, W.DKFZ* ; Jones, D.DKFZ* ; Pfister, S.DKFZ* ; Al-Hussaini, M. ; Hou, Y. ; Costa, F. D. ; Ille, S. ; Sehrig, J. ; Piovesan-Lago, P. ; Suchorska, B. ; Ahmad, O.DKFZ* ; Schweizer, L.DKFZ* ; Bertero, L. ; Acker, T. ; Tauziède-Espariat, A. ; Varlet, P. ; Brandner, S. ; Bai, X. ; von Deimling, A.DKFZ* ; Sahm, F. (Last author)DKFZ*
AI-based histopathological classification of central nervous system tumours
[10.21203/rs.3.rs-5600492/v1]   BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Preprint Heidari, E. (First author)DKFZ* ; Moorman, A. ; Unyi, D. ; Pasnuri, N. ; Rukhovich, G.DKFZ* ; Calafato, D.DKFZ* ; Mathioudaki, A.DKFZ* ; Chan, J. M. ; Nawy, T. ; Gerstung, M. (Corresponding author)DKFZ* ; Pe’er, D. ; Stegle, O. (Last author)DKFZ*
Segger: Fast and accurate cell segmentation of imaging-based spatial transcriptomics data
[10.1101/2025.03.14.643160]   BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article (Erratum/Correction) Shmatko, A. (First author)DKFZ* ; Jung, A. W. ; Gaurav, K. ; Brunak, S. ; Mortensen, L. H. ; Birney, E. ; Fitzgerald, T. ; Gerstung, M. (Last author)DKFZ*
Author Correction: Learning the natural history of human disease with generative transformers (Nature, (2025), 647, 8088, (248-256), 10.1038/s41586-025-09529-3)
Nature 647, E8 (2025) [10.1038/s41586-025-09879-y]2025   BibTeX | EndNote: XML, Text | RIS

All known publications ...
Download: BibTeX | EndNote XML,  Text | RIS |