B450

Recent Publications

All known publications ...
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http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article McLoughlin, M. A. ; Cheloor Kovilakam, S. ; Dunn, W. G. ; Gu, M. ; Tobin, J. ; Pershad, Y. ; Williams, N. ; Leongamornlert, D. ; Dawson, K. ; Bond, L. ; Marando, L. ; Wen, S. ; Wilson, R. ; Valenzano, G. ; Symeonidou, V. ; Rak, J. ; Damaskou, A. ; Gozdecka, M. ; Liu, X. ; Barcena, C. ; Nomdedeu, J. ; Costeas, P. ; Dimitriou, I. D. ; Fiorillo, E. ; Orrù, V. ; de Almeida, J. G. ; McKerrell, T. ; Cullen, M. ; Mohorianu, I. ; Foukaneli, T. ; Warren, A. J. ; Wong, C. ; Follows, G. ; Godfrey, A. L. ; Gudgin, E. ; Cucca, F. ; McKinney, E. ; Baxter, E. J. ; Gerstung, M.DKFZ* ; Mitchell, J. ; Wiseman, D. ; Bick, A. G. ; Fabre, M. ; Quiros, P. M. ; Nangalia, J. ; Kar, S. ; Vassiliou, G. S.
Telomere attrition becomes an instrument for clonal selection in aging hematopoiesis and leukemogenesis.
Nature genetics nn, nn (2025) [10.1038/s41588-025-02296-x]2025   BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Breinig, M. ; Lomakin, A. (First author)DKFZ* ; Heidari, E. (First author)DKFZ* ; Ritter, M.DKFZ* ; Rukhovich, G.DKFZ* ; Böse, L. ; Butthof, L. ; Wendler-Link, L. ; Wiethoff, H. ; Poth, T. ; Sahm, F.DKFZ* ; Schirmacher, P. ; Stegle, O.DKFZ* ; Gerstung, M.DKFZ* ; Tschaharganeh, D. F. (Last author)DKFZ*
Integrated in vivo combinatorial functional genomics and spatial transcriptomics of tumours to decode genotype-to-phenotype relationships.
Nature biomedical engineering nn, nn (2025) [10.1038/s41551-025-01437-1]2025   BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Patel, A. J. (First author)DKFZ* ; Göbel, K.DKFZ* ; Ille, S. ; et al
Prospective, multicenter validation of a platform for rapid molecular profiling of central nervous system tumors.
Nature medicine 31(5), 1567-1577 (2025) [10.1038/s41591-025-03562-5]2025   BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Isebia, K. T. ; de Jong, A. C. ; van Dessel, L. F. ; de Weerd, V. ; Beaufort, C. ; Helmijr, J. ; Nakauma-González, J. A. ; van Riet, J.DKFZ* ; Hamberg, P. ; Vis, D. ; van der Heijden, M. S. ; Beije, N. ; Lolkema, M. P. ; Deger, T. ; Wilting, S. M. ; de Wit, R. ; Jansen, M. P. H. M. ; Martens, J. W. M.
Cell-free DNA aneuploidy score as a dynamic early response marker in prostate cancer.
Molecular oncology nn, nn (2025) [10.1002/1878-0261.13797]2025   BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Costea, J. ; Rauwolf, K. K. ; Zafferani, P.DKFZ* ; Rausch, T. ; Mathioudaki, A.DKFZ* ; Zaugg, J. ; Schrappe, M. ; Eckert, C.DKFZ* ; Escherich, G. ; Bourquin, J. P. ; Bornhauser, B. ; Kulozik, A.DKFZ* ; Korbel, J. (Last author)DKFZ*
Role of stem-like cells in chemotherapy resistance and relapse in pediatric T-cell acute lymphoblastic leukemia.
Nature Communications 16(1), 5413 (2025) [10.1038/s41467-025-61222-1]2025   BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article J. Costa, R. ; Gerstung, M. (Last author)DKFZ*
ebmstate: An R Package For Disease Progression Analysis Under Empirical Bayes Cox Models
The R journal 16(1), 15 - 38 (2025) [10.32614/RJ-2024-002]2025   BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Ritter, M. (First author)DKFZ* ; Blume, C.DKFZ* ; Tang, Y.DKFZ* ; Patel, A. J.DKFZ* ; Patel, B.DKFZ* ; Berghaus, N.DKFZ* ; Kada Benotmane, J. ; Kueckelhaus, J. ; Yabo, Y. ; Zhang, J. ; Grabis, E. ; Villa, G. ; Zimmer, D. N. ; Khriesh, A. ; Sievers, P.DKFZ* ; Seferbekova, Z.DKFZ* ; Hinz, F.DKFZ* ; Ravi, V. M. ; Seiz-Rosenhagen, M. ; Ratliff, M. ; Herold-Mende, C. ; Schnell, O.DKFZ* ; Beck, J. ; Wick, W.DKFZ* ; von Deimling, A.DKFZ* ; Gerstung, M.DKFZ* ; Heiland, D. H.DKFZ* ; Sahm, F. (Last author)DKFZ*
Spatially resolved transcriptomics and graph-based deep learning improve accuracy of routine CNS tumor diagnostics.
Nature cancer 6(2), 292-306 (2025) [10.1038/s43018-024-00904-z]2025   BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Yue, H. ; Tang, Y. (First author)DKFZ* ; Li, A. ; Zhang, L. ; Niu, Y. ; Zhang, Y. ; Wang, H. ; Luo, J. ; Zhao, Y. ; He, S. ; Chen, C. ; Chen, R.
Enzymes Repertoires and Genomic Insights into Lycium Barbarum Pectin Polysaccharides Biosynthesis.
Genomics, proteomics & bioinformatics 22(6), qzae079 (2025) [10.1093/gpbjnl/qzae079]2025   BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Marconato, L. (First author)DKFZ* ; Palla, G. ; Yamauchi, K. A. ; Virshup, I. ; Heidari, E.DKFZ* ; Treis, T.DKFZ* ; Vierdag, W.-M. ; Toth, M. ; Stockhaus, S. ; Shrestha, R. B. ; Rombaut, B. ; Pollaris, L. ; Lehner, L. ; Vöhringer, H. ; Kats, I.DKFZ* ; Saeys, Y. ; Saka, S. K. ; Huber, W. ; Gerstung, M.DKFZ* ; Moore, J. ; Theis, F. J. ; Stegle, O. (Last author)DKFZ*
SpatialData: an open and universal data framework for spatial omics.
Nature methods 22(1), 58-62 (2025) [10.1038/s41592-024-02212-x]2025     Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article (Other) Gerstung, M. (First author)DKFZ* ; Liu, D. ; Ghassemi, M. ; Zou, J. ; Chowell, D. ; Teuwen, J. ; Mahmood, F. ; Kather, J. N.
Artificial intelligence.
Cancer cell 42(6), 915 - 918 (2024) [10.1016/j.ccell.2024.05.021]2024   BibTeX | EndNote: XML, Text | RIS

All known publications ...
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