D150

Recent Publications

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http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Moris Amro, E. (First author)DKFZ* ; Gkougkousis, C. (First author)DKFZ* ; Seebass, J. G.DKFZ* ; Telioglu, I.DKFZ* ; Bakr, A. M. A.DKFZ* ; Lorenzo, J. P.DKFZ* ; Abolhassani, H. ; Altenhofen, J. ; Berntson, L. ; Ruf, S.DKFZ* ; Hammarström, L. ; Pan-Hammarström, Q. ; Imbusch, C. D. ; Papavasiliou, F. (Last author)DKFZ*
APOBEC2 deficiency disrupts hematopoietic lineage commitment, resulting in emergence of dual identity lymphocytes in mice and humans.
Proceedings of the National Academy of Sciences of the United States of America 123(23), e2531122123 (2026) [10.1073/pnas.2531122123]2026   BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Madi, A. A. M. (First author)DKFZ* ; Shi, H. ; Su, M. ; Mady, A. ; Lv, B. ; Wang, H. ; Yang, B. ; Yan, Z. ; Jin, X. ; Wu, L. ; Lv, M. ; Hering, M.DKFZ* ; Ma, S. ; Mieg, A.DKFZ* ; Zettl, F.DKFZ* ; Yan, X.DKFZ* ; Mohr, K.DKFZ* ; Knabe, N.DKFZ* ; Poschet, G. ; Richter, K.DKFZ* ; Schleußner, N.DKFZ* ; Jackstadt, R.-F.DKFZ* ; Loges, S.DKFZ* ; Papavasiliou, F.DKFZ* ; Wang, X. ; Wu, J. ; Cui, G. (Last author)DKFZ*
DGAT1 mediates sex-specific CD8+ T cell antitumour responses.
Nature metabolism 8, 685–703 (2026) [10.1038/s42255-026-01462-7]2026     Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Chen, Y. (First author)DKFZ* ; Preikschat, A. ; Arnold, A.DKFZ* ; Pecori, R.DKFZ* ; Gomez-Zepeda, D.DKFZ* ; Tenzer, S. (Last author)DKFZ*
Benchmarking Software for DDA-PASEF Immunopeptidomics.
Molecular & cellular proteomics 25(4), 101492 (2026) [10.1016/j.mcpro.2025.101492]2026     Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Wu, C. C. ; Naarmann-de Vries, I. S. ; Hartmann, J. ; Nidoieva, Z. ; Kopietz, K. ; Marchand, V. ; Özrendeci, Z. ; Lindner, D. ; Schelchshorn, S. ; Flad, S.DKFZ* ; Frye, M.DKFZ* ; Papavasiliou, F.DKFZ* ; Schirmeister, T. ; Stoecklin, G. ; Schott, J. ; Motorin, Y. ; Tuorto, F. ; Dieterich, C. ; Helm, M. ; Ruggieri, A.
The two-step purification method ViREn identifies a single NSUN6-mediated 5-methylcytosine modification promoting dengue virus RNA genome turnover.
Nucleic acids research 54(2), gkag003 (2026) [10.1093/nar/gkag003]2026     Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Spangenberg, J. ; Mündnich, S. ; Busch, A. ; Pastore, S. ; Wierczeiko, A. ; Goettsch, W. ; Dietrich, V. ; Pryszcz, L. P. ; Cruciani, S. ; Novoa, E. M. ; Joshi, K. ; Perera, R. ; Di Giorgio, S.DKFZ* ; Arrubarrena, P. ; Tellioglu Akcay, I.DKFZ* ; Poon, C.-L. ; Wan, Y. K. ; Göke, J. ; Hildebrandt, A. ; Dieterich, C. ; Helm, M. ; Marz, M. ; Gerber, S. ; Alagna, N.
The RMaP challenge of predicting RNA modifications by nanopore sequencing
Communications chemistry 8(1), 115 (2025) [10.1038/s42004-025-01507-0]2025   BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Fonzino, A. ; Mazzacuva, P. L. ; Handen, A. ; Silvestris, D. A. ; Arnold, A.DKFZ* ; Pecori, R.DKFZ* ; Pesole, G. ; Picardi, E.
REDInet: a temporal convolutional network-based classifier for A-to-I RNA editing detection harnessing million known events.
Briefings in bioinformatics 26(2), bbaf107 (2025) [10.1093/bib/bbaf107]2025     Fulltext by Pubmed Central BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Ammara, A. ; Carone, A. ; Lucarini, L. ; Sgambellone, S. ; Marri, S. ; Villano, S. ; Matucci, R. ; Luga, G. ; Fittipaldi, C. ; Pecori, R.DKFZ* ; Pieraccini, G. ; Di Serio, C. ; García-Llorca, A. ; Eysteinsson, T. ; Kalinin, S. ; Viita, J. A. O. ; Urtti, A. ; Carta, F. ; Selleri, S. ; Supuran, C. T.
Repurposing Drug Metabolites into Dual β-Adrenergic Receptor-Carbonic Anhydrase Modulators as Potential Tools for Ocular Disorders.
Journal of medicinal chemistry 68(17), 18579-18596 (2025) [10.1021/acs.jmedchem.5c01459]2025   BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Preprint Pecori, R. (First author)DKFZ* ; Casati, B. (First author)DKFZ* ; Merdler-Rabinowicz, R. ; Landesman, N. ; Sanghvi, K.DKFZ* ; Zens, S.DKFZ* ; Kipfstuhl, K.DKFZ* ; Pinamonti, V. ; Arnold, A.DKFZ* ; Lindner, J. M. ; Platten, M.DKFZ* ; Offringa, R.DKFZ* ; Carretero, R.DKFZ* ; Ruppin, E. ; Levanon, E. Y. ; Papavasiliou, F. (Last author)DKFZ*
Employing RNA editing to engineer personalized tumor-specific neoantigens (editopes)
[10.1101/2023.03.16.532918]   BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Dissertation / PhD Thesis Casati, B.DKFZ*
Diagnostic and Therapeutic Applications of Programmable RNA-guided Technologies in Infection and Cancer
Heidelberg : University of Heidelberg 142 pp. (2024)2024 = Dissertation, Universität Heidelberg, 2024     Fulltext Fulltext by OpenAccess repository BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Master Thesis Tellioglu, I.DKFZ*
Investigating the role of APOBEC2 in the hematopoietic system
Masterarbeit, Universität Heidelberg, 2024   BibTeX | EndNote: XML, Text | RIS

All known publications ...
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