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@ARTICLE{Zucknick:127886,
author = {M. Zucknick$^*$ and M. Saadati$^*$ and A. Benner$^*$},
title = {{N}onidentical twins: {C}omparison of frequentist and
{B}ayesian lasso for {C}ox models.},
journal = {Biometrical journal},
volume = {57},
number = {6},
issn = {0323-3847},
address = {Berlin},
publisher = {Wiley-VCH},
reportid = {DKFZ-2017-03908},
pages = {959 - 981},
year = {2015},
abstract = {One important task in translational cancer research is the
search for new prognostic biomarkers to improve survival
prognosis for patients. The use of high-throughput
technologies allows simultaneous measurement of genome-wide
gene expression or other genomic data for all patients in a
clinical trial. Penalized likelihood methods such as lasso
regression can be applied to such high-dimensional data,
where the number of (genomic) covariables is usually much
larger than the sample size. There is a connection between
the lasso and the Bayesian regression model with independent
Laplace priors on the regression parameters, and
understanding this connection has been useful for
understanding the properties of lasso estimates in linear
models (e.g. Park and Casella, 2008). In this paper, we
study the lasso in the frequentist and Bayesian frameworks
in the context of Cox models. For the Bayesian lasso we
extend the approach by Lee et al. (2011). In particular, we
impose the lasso penalty only on the genome features, but
not on relevant clinical covariates, to allow the mandatory
inclusion of important established factors. We investigate
the models in high- and low-dimensional simulation settings
and in an application to chronic lymphocytic leukemia.},
cin = {C060},
ddc = {570},
cid = {I:(DE-He78)C060-20160331},
pnm = {313 - Cancer risk factors and prevention (POF3-313)},
pid = {G:(DE-HGF)POF3-313},
typ = {PUB:(DE-HGF)16},
pubmed = {pmid:26417963},
doi = {10.1002/bimj.201400160},
url = {https://inrepo02.dkfz.de/record/127886},
}