Home > Publications database > Arthrobacter wenxiniae sp. nov., a novel plant growth-promoting rhizobacteria species harbouring a carotenoids biosynthetic gene cluster. > print

001     178676
005     20240229143552.0
024 7 _ |a 10.1007/s10482-021-01701-9
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037 _ _ |a DKFZ-2022-00192
041 _ _ |a English
082 _ _ |a 610
100 1 _ |a Sun, Yu-Chen
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245 _ _ |a Arthrobacter wenxiniae sp. nov., a novel plant growth-promoting rhizobacteria species harbouring a carotenoids biosynthetic gene cluster.
260 _ _ |a Dordrecht [u.a.]
|c 2022
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500 _ _ |a 2022 Mar;115(3):353-364
520 _ _ |a A bacterial strain, designated AETb3-4T was isolated from the rhizosphere of lily. Comparison of 16S rRNA gene sequences showed that the sequence from strain AETb3-4T exhibits high sequence similarity with those of Arthrobacter silviterrae KIS14-16T (97.9%), Arthrobacter livingstonensis LI2T (97.2%) and Arthrobacter stackebrandtii CCM 2783T (97.0%). Whole genome average nucleotide identity (ANI) and the digital DNA-DNA hybridization (dDDH) values between strain AETb3-4T and the reference strains A. silviterrae DSM 27180T, A. livingstonensis L12T and A. stackebrandtii DSM 16005T were below 83.6% and 27.7%, respectively, values which are considerably below the proposed thresholds for the species delineation, consistent with the proposal that strain AETb3-4T represents a novel species. The genome size of strain AETb3-4T is 4.33 Mb and the genomic DNA G + C content is 67.3%. The main polar lipids were identified as phosphatidylglycerol, diphosphatidylglycero, phosphatidylinositol and an unidentified glycolipid. The major fatty acids (> 10%) were identified as anteiso-C15: 0 and anteiso-C17: 0. The predominant menaquinone was found to be menaquinone 9 (MK-9) (H2) (82.2%). Phenotypic tests allowed the strain to be differentiated from its close phylogenetic neighbors. Based on the results obtained, it is proposed that the strain AETb3-4T (= CFCC 16390T = LMG 31708T) represents a novel species in the genus Arthrobacter, for which the names Arthrobacter wenxiniae sp. nov. is proposed. In addition, the novel strain AETb3-4T has multiple plant growth-promoting characters including ACC-deaminase activity and production of IAA. Furthermore, the genome contains secondary metabolite biosynthesis gene clusters, including a carotenoid biosynthetic gene cluster, suggesting potential capacities for secondary metabolite synthesis. These data suggest that strain AETb3-4T may have potential applications both in medicine and sustainable agriculture.
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650 _ 7 |a Arthrobacter wenxiniae
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650 _ 7 |a Genome sequencing
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650 _ 7 |a Plant growth-promoting characters
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650 _ 7 |a Polyphasic taxonomy
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650 _ 7 |a Rhizosphere of lily
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700 1 _ |a Sun, Pengbo
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700 1 _ |a Xue, Jing
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700 1 _ |a Yi, Xin-Xin
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700 1 _ |a Sun, Jian-Guang
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700 1 _ |a Zhang, Xiuhai
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700 1 _ |a Gao, Jun-Lian
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