000181416 001__ 181416
000181416 005__ 20240301130857.0
000181416 0247_ $$2pmid$$apmid:28883167
000181416 0247_ $$2ISSN$$a0926-9630
000181416 0247_ $$2ISSN$$a1879-8365
000181416 037__ $$aDKFZ-2022-01984
000181416 041__ $$aEnglish
000181416 082__ $$a300
000181416 1001_ $$aMate, Sebastian$$b0
000181416 245__ $$aOn-The-Fly Query Translation Between i2b2 and Samply in the German Biobank Node (GBN) Prototypes.
000181416 260__ $$aAmsterdam$$bIOS Press$$c2017
000181416 3367_ $$2DRIVER$$aarticle
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000181416 3367_ $$2ORCID$$aJOURNAL_ARTICLE
000181416 3367_ $$00$$2EndNote$$aJournal Article
000181416 500__ $$aPOF Topic: 317
000181416 520__ $$aInformation retrieval is a major challenge in medical informatics. Various research projects have worked on this task in recent years on an institutional level by developing tools to integrate and retrieve information. However, when it comes down to querying such data across institutions, the challenge persists due to the high heterogeneity of data and differences in software systems. The German Biobank Node (GBN) project faced this challenge when trying to interconnect four biobanks to enable distributed queries for biospecimens. All biobanks had already established integrated data repositories, and some of them were already part of research networks. Instead of developing another software platform, GBN decided to form a bridge between these. This paper describes and discusses a core component from the GBN project, the OmniQuery library, which was implemented to enable on-the-fly query translation between heterogeneous research infrastructures.
000181416 536__ $$0G:(DE-HGF)POF3-317$$a317 - Translational cancer research (POF3-317)$$cPOF3-317$$fPOF III$$x0
000181416 588__ $$aDataset connected to PubMed, , Journals: inrepo02.dkfz.de
000181416 650_7 $$2Other$$aData harmonization
000181416 650_7 $$2Other$$abiobanking
000181416 650_7 $$2Other$$afederated search
000181416 650_7 $$2Other$$ainteroperability
000181416 650_2 $$2MeSH$$aBiological Specimen Banks
000181416 650_2 $$2MeSH$$aInformation Storage and Retrieval
000181416 650_2 $$2MeSH$$aSoftware
000181416 7001_ $$0P:(DE-He78)44b380dff67aa91ef0c1d8dac5868fd1$$aVormstein, Patric Daniel$$b1
000181416 7001_ $$aKadioglu, Dennis$$b2
000181416 7001_ $$aMajeed, Raphael W$$b3
000181416 7001_ $$0P:(DE-He78)e4ad7b4e684492de43cfcb12e5397439$$aLablans, Martin$$b4$$udkfz
000181416 7001_ $$aProkosch, Hans-Ulrich$$b5
000181416 7001_ $$0P:(DE-He78)dea327b39644826b7484600922cf0e50$$aStorf, Holger$$b6
000181416 773__ $$0PERI:(DE-600)1088535-3$$gVol. 243$$p42-46$$tStudies in health technology and informatics$$v243$$x0926-9630$$y2017
000181416 909CO $$ooai:inrepo02.dkfz.de:181416$$pVDB
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000181416 9131_ $$0G:(DE-HGF)POF3-317$$1G:(DE-HGF)POF3-310$$2G:(DE-HGF)POF3-300$$3G:(DE-HGF)POF3$$4G:(DE-HGF)POF$$aDE-HGF$$bGesundheit$$lKrebsforschung$$vTranslational cancer research$$x0
000181416 9141_ $$y2017
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000181416 915__ $$0StatID:(DE-HGF)0300$$2StatID$$aDBCoverage$$bMedline
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000181416 9201_ $$0I:(DE-He78)G230-20160331$$kG230$$lMedizinische Informatik in der Translationalen Onkologie$$x1
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