% IMPORTANT: The following is UTF-8 encoded. This means that in the presence % of non-ASCII characters, it will not work with BibTeX 0.99 or older. % Instead, you should use an up-to-date BibTeX implementation like “bibtex8” or % “biber”. @ARTICLE{Mynarek:182882, author = {M. Mynarek and D. Obrecht and M. Sill$^*$ and D. Sturm$^*$ and K. Kloth-Stachnau and F. Selt$^*$ and J. Ecker$^*$ and K. von Hoff and B.-O. Juhnke and T. Goschzik and T. Pietsch and M. Bockmayr and M. Kool$^*$ and A. von Deimling$^*$ and O. Witt$^*$ and U. Schüller and M. Benesch and N. U. Gerber and F. Sahm$^*$ and D. Jones$^*$ and A. Korshunov$^*$ and S. Pfister$^*$ and S. Rutkowski and T. Milde$^*$}, title = {{I}dentification of low and very high-risk patients with non-{WNT}/non-{SHH} medulloblastoma by improved clinico-molecular stratification of the {HIT}2000 and {I}-{HIT}-{MED} cohorts.}, journal = {Acta neuropathologica}, volume = {145}, number = {1}, issn = {0001-6322}, address = {Heidelberg}, publisher = {Springer}, reportid = {DKFZ-2022-02988}, pages = {97-112}, year = {2023}, note = {#LA:B310# / 2023 Jan;145(1):97-112}, abstract = {Molecular groups of medulloblastoma (MB) are well established. Novel risk stratification parameters include Group 3/4 (non-WNT/non-SHH) methylation subgroups I-VIII or whole-chromosomal aberration (WCA) phenotypes. This study investigates the integration of clinical and molecular parameters to improve risk stratification of non-WNT/non-SHH MB. Non-WNT/non-SHH MB from the HIT2000 study and the HIT-MED registries were selected based on availability of DNA-methylation profiling data. MYC or MYCN amplification and WCA of chromosomes 7, 8, and 11 were inferred from methylation array-based copy number profiles. In total, 403 non-WNT/non-SHH MB were identified, 346/403 $(86\%)$ had a methylation class family Group 3/4 methylation score (classifier v11b6) ≥ 0.9, and 294/346 $(73\%)$ were included in the risk stratification modeling based on Group 3 or 4 score (v11b6) ≥ 0.8 and subgroup I-VIII score $(mb_g34)$ ≥ 0.8. Group 3 MB (5y-PFS, survival estimation ± standard deviation: 41.4 ± $4.6\%;$ 5y-OS: 48.8 ± $5.0\%)$ showed poorer survival compared to Group 4 (5y-PFS: 68.2 ± $3.7\%;$ 5y-OS: 84.8 ± $2.8\%).$ Subgroups II (5y-PFS: 27.6 ± $8.2\%)$ and III (5y-PFS: 37.5 ± $7.9\%)$ showed the poorest and subgroup VI (5y-PFS: 76.6 ± $7.9\%),$ VII (5y-PFS: 75.9 ± $7.2\%),$ and VIII (5y-PFS: 66.6 ± $5.8\%)$ the best survival. Multivariate analysis revealed subgroup in combination with WCA phenotype to best predict risk of progression and death. The integration of clinical (age, M and R status) and molecular (MYC/N, subgroup, WCA phenotype) variables identified a low-risk stratum with a 5y-PFS of 94 ± 5.7 and a very high-risk stratum with a 5y-PFS of 29 ± $6.1\%.$ Validation in an international MB cohort confirmed the combined stratification scheme with 82.1 ± $6.0\%$ 5y-PFS in the low and 47.5 ± $4.1\%$ in very high-risk groups, and outperformed the clinical model. These newly identified clinico-molecular low-risk and very high-risk strata, accounting for $6\%,$ and $21\%$ of non-WNT/non-SHH MB patients, respectively, may improve future treatment stratification.}, keywords = {Group 3/4 (Other) / Medulloblastoma (Other) / Non-WNT/non-SHH (Other) / Risk stratification (Other)}, cin = {B360 / B310 / B062 / HD01 / B300}, ddc = {610}, cid = {I:(DE-He78)B360-20160331 / I:(DE-He78)B310-20160331 / I:(DE-He78)B062-20160331 / I:(DE-He78)HD01-20160331 / I:(DE-He78)B300-20160331}, pnm = {312 - Funktionelle und strukturelle Genomforschung (POF4-312)}, pid = {G:(DE-HGF)POF4-312}, typ = {PUB:(DE-HGF)16}, pubmed = {pmid:36459208}, doi = {10.1007/s00401-022-02522-4}, url = {https://inrepo02.dkfz.de/record/182882}, }