Home > Publications database > Multiomic neuropathology improves diagnostic accuracy in pediatric neuro-oncology. > print |
001 | 274348 | ||
005 | 20240229154931.0 | ||
024 | 7 | _ | |a 10.1038/s41591-023-02255-1 |2 doi |
024 | 7 | _ | |a pmid:36928815 |2 pmid |
024 | 7 | _ | |a 1078-8956 |2 ISSN |
024 | 7 | _ | |a 1546-170X |2 ISSN |
024 | 7 | _ | |a altmetric:143971776 |2 altmetric |
037 | _ | _ | |a DKFZ-2023-00550 |
041 | _ | _ | |a English |
082 | _ | _ | |a 610 |
100 | 1 | _ | |a Sturm, Dominik |0 P:(DE-He78)a46a5b2a871859c8e2d63d2f8c666807 |b 0 |e First author |u dkfz |
245 | _ | _ | |a Multiomic neuropathology improves diagnostic accuracy in pediatric neuro-oncology. |
260 | _ | _ | |a New York, NY |c 2023 |b Nature America Inc. |
336 | 7 | _ | |a article |2 DRIVER |
336 | 7 | _ | |a Output Types/Journal article |2 DataCite |
336 | 7 | _ | |a Journal Article |b journal |m journal |0 PUB:(DE-HGF)16 |s 1687856284_19596 |2 PUB:(DE-HGF) |
336 | 7 | _ | |a ARTICLE |2 BibTeX |
336 | 7 | _ | |a JOURNAL_ARTICLE |2 ORCID |
336 | 7 | _ | |a Journal Article |0 0 |2 EndNote |
500 | _ | _ | |a #EA:B360#LA:B300#LA:B062#LA:B360# / 2023 Apr;29(4):917-926 |
520 | _ | _ | |a The large diversity of central nervous system (CNS) tumor types in children and adolescents results in disparate patient outcomes and renders accurate diagnosis challenging. In this study, we prospectively integrated DNA methylation profiling and targeted gene panel sequencing with blinded neuropathological reference diagnostics for a population-based cohort of more than 1,200 newly diagnosed pediatric patients with CNS tumors, to assess their utility in routine neuropathology. We show that the multi-omic integration increased diagnostic accuracy in a substantial proportion of patients through annotation to a refining DNA methylation class (50%), detection of diagnostic or therapeutically relevant genetic alterations (47%) or identification of cancer predisposition syndromes (10%). Discrepant results by neuropathological WHO-based and DNA methylation-based classification (30%) were enriched in histological high-grade gliomas, implicating relevance for current clinical patient management in 5% of all patients. Follow-up (median 2.5 years) suggests improved survival for patients with histological high-grade gliomas displaying lower-grade molecular profiles. These results provide preliminary evidence of the utility of integrating multi-omics in neuropathology for pediatric neuro-oncology. |
536 | _ | _ | |a 312 - Funktionelle und strukturelle Genomforschung (POF4-312) |0 G:(DE-HGF)POF4-312 |c POF4-312 |f POF IV |x 0 |
588 | _ | _ | |a Dataset connected to CrossRef, PubMed, , Journals: inrepo02.dkfz.de |
700 | 1 | _ | |a Capper, David |0 P:(DE-He78)51bf9ae9cb5771b30c483e5597ef606c |b 1 |u dkfz |
700 | 1 | _ | |a Andreiuolo, Felipe |0 0000-0002-2568-6155 |b 2 |
700 | 1 | _ | |a Gessi, Marco |b 3 |
700 | 1 | _ | |a Kölsche, Christian |b 4 |
700 | 1 | _ | |a Reinhardt, Annekathrin |b 5 |
700 | 1 | _ | |a Sievers, Philipp |b 6 |
700 | 1 | _ | |a Wefers, Annika K |b 7 |
700 | 1 | _ | |a Ebrahimi, Azadeh |0 P:(DE-He78)c1e6f8388afe92ba3e13be35e7bf54d8 |b 8 |u dkfz |
700 | 1 | _ | |a Suwala, Abigail K |0 P:(DE-He78)c77fccff3e6c42b017b2e8a09813590c |b 9 |u dkfz |
700 | 1 | _ | |a Gielen, Gerrit H |0 0000-0002-2707-0290 |b 10 |
700 | 1 | _ | |a Sill, Martin |0 P:(DE-He78)45440b44791309bd4b7dbb4f73333f9b |b 11 |u dkfz |
700 | 1 | _ | |a Schrimpf, Daniel |b 12 |
700 | 1 | _ | |a Stichel, Damian |0 P:(DE-He78)d20d08adc992abdb6ccffa1686f1ba17 |b 13 |
700 | 1 | _ | |a Hovestadt, Volker |b 14 |
700 | 1 | _ | |a Daenekas, Bjarne |0 0000-0002-0237-8694 |b 15 |
700 | 1 | _ | |a Rode, Agata |0 P:(DE-He78)589c214eab93a46a3c170485420edfcb |b 16 |
700 | 1 | _ | |a Hamelmann, Stefan |0 P:(DE-He78)875b52cddc351d6eca86de4f404f4631 |b 17 |u dkfz |
700 | 1 | _ | |a Previti, Christopher |0 P:(DE-He78)1bae3784eb554a693b0e7ce03a20bdb8 |b 18 |u dkfz |
700 | 1 | _ | |a Jäger, Natalie |0 P:(DE-He78)bff9e3e3d86865d2b0836bb8f3ce98f3 |b 19 |u dkfz |
700 | 1 | _ | |a Buchhalter, Ivo |0 P:(DE-He78)e84b3187ddd3529f884082e30f228c66 |b 20 |u dkfz |
700 | 1 | _ | |a Blattner-Johnson, Mirjam |0 P:(DE-He78)261d2b84aded878003e6e35d18113831 |b 21 |u dkfz |
700 | 1 | _ | |a Jones, Barbara C |0 P:(DE-He78)fae1bf941c5fd76cf5356ecfa1243cc4 |b 22 |u dkfz |
700 | 1 | _ | |a Warmuth-Metz, Monika |b 23 |
700 | 1 | _ | |a Bison, Brigitte |b 24 |
700 | 1 | _ | |a Grund, Kerstin |b 25 |
700 | 1 | _ | |a Sutter, Christian |b 26 |
700 | 1 | _ | |a Hirsch, Steffen |0 P:(DE-He78)5e3d4de4b59cd068969e101847794267 |b 27 |u dkfz |
700 | 1 | _ | |a Dikow, Nicola |b 28 |
700 | 1 | _ | |a Hasselblatt, Martin |b 29 |
700 | 1 | _ | |a Schüller, Ulrich |0 0000-0002-8731-1121 |b 30 |
700 | 1 | _ | |a Gerber, Nicolas U |b 31 |
700 | 1 | _ | |a White, Christine L |0 0000-0002-5920-0029 |b 32 |
700 | 1 | _ | |a Buntine, Molly K |b 33 |
700 | 1 | _ | |a Kinross, Kathryn |b 34 |
700 | 1 | _ | |a Algar, Elizabeth M |0 0000-0002-9875-8092 |b 35 |
700 | 1 | _ | |a Hansford, Jordan R |0 0000-0001-7733-383X |b 36 |
700 | 1 | _ | |a Gottardo, Nicholas G |0 0000-0002-1082-6776 |b 37 |
700 | 1 | _ | |a Hernáiz Driever, Pablo |0 0000-0003-3135-3872 |b 38 |
700 | 1 | _ | |a Gnekow, Astrid |0 0000-0002-7356-6887 |b 39 |
700 | 1 | _ | |a Witt, Olaf |0 P:(DE-He78)143af26de9d57bf624771616318aaf7c |b 40 |u dkfz |
700 | 1 | _ | |a Müller, Hermann L |0 0000-0003-4929-9966 |b 41 |
700 | 1 | _ | |a Calaminus, Gabriele |b 42 |
700 | 1 | _ | |a Fleischhack, Gudrun |0 0000-0001-5714-007X |b 43 |
700 | 1 | _ | |a Kordes, Uwe |0 0000-0001-6375-2320 |b 44 |
700 | 1 | _ | |a Mynarek, Martin |0 0000-0003-3302-2719 |b 45 |
700 | 1 | _ | |a Rutkowski, Stefan |b 46 |
700 | 1 | _ | |a Frühwald, Michael C |0 0000-0002-8237-1854 |b 47 |
700 | 1 | _ | |a Kramm, Christof M |0 0000-0002-5017-926X |b 48 |
700 | 1 | _ | |a von Deimling, Andreas |0 P:(DE-He78)a8a10626a848d31e70cfd96a133cc144 |b 49 |u dkfz |
700 | 1 | _ | |a Pietsch, Torsten |b 50 |
700 | 1 | _ | |a Sahm, Felix |0 P:(DE-He78)a1f4b408b9155beb2a8f7cba4d04fe88 |b 51 |e Last author |u dkfz |
700 | 1 | _ | |a Pfister, Stefan M |0 P:(DE-He78)f746aa965c4e1af518b016de3aaff5d9 |b 52 |e Last author |u dkfz |
700 | 1 | _ | |a Jones, David |0 P:(DE-He78)551bb92841f634070997aa168d818492 |b 53 |e Last author |u dkfz |
773 | _ | _ | |a 10.1038/s41591-023-02255-1 |0 PERI:(DE-600)1484517-9 |n 4 |p 917-926 |t Nature medicine |v 29 |y 2023 |x 1078-8956 |
909 | C | O | |p VDB |o oai:inrepo02.dkfz.de:274348 |
910 | 1 | _ | |a Deutsches Krebsforschungszentrum |0 I:(DE-588b)2036810-0 |k DKFZ |b 0 |6 P:(DE-He78)a46a5b2a871859c8e2d63d2f8c666807 |
910 | 1 | _ | |a Deutsches Krebsforschungszentrum |0 I:(DE-588b)2036810-0 |k DKFZ |b 1 |6 P:(DE-He78)51bf9ae9cb5771b30c483e5597ef606c |
910 | 1 | _ | |a Deutsches Krebsforschungszentrum |0 I:(DE-588b)2036810-0 |k DKFZ |b 8 |6 P:(DE-He78)c1e6f8388afe92ba3e13be35e7bf54d8 |
910 | 1 | _ | |a Deutsches Krebsforschungszentrum |0 I:(DE-588b)2036810-0 |k DKFZ |b 9 |6 P:(DE-He78)c77fccff3e6c42b017b2e8a09813590c |
910 | 1 | _ | |a Deutsches Krebsforschungszentrum |0 I:(DE-588b)2036810-0 |k DKFZ |b 11 |6 P:(DE-He78)45440b44791309bd4b7dbb4f73333f9b |
910 | 1 | _ | |a Deutsches Krebsforschungszentrum |0 I:(DE-588b)2036810-0 |k DKFZ |b 13 |6 P:(DE-He78)d20d08adc992abdb6ccffa1686f1ba17 |
910 | 1 | _ | |a Deutsches Krebsforschungszentrum |0 I:(DE-588b)2036810-0 |k DKFZ |b 16 |6 P:(DE-He78)589c214eab93a46a3c170485420edfcb |
910 | 1 | _ | |a Deutsches Krebsforschungszentrum |0 I:(DE-588b)2036810-0 |k DKFZ |b 17 |6 P:(DE-He78)875b52cddc351d6eca86de4f404f4631 |
910 | 1 | _ | |a Deutsches Krebsforschungszentrum |0 I:(DE-588b)2036810-0 |k DKFZ |b 18 |6 P:(DE-He78)1bae3784eb554a693b0e7ce03a20bdb8 |
910 | 1 | _ | |a Deutsches Krebsforschungszentrum |0 I:(DE-588b)2036810-0 |k DKFZ |b 19 |6 P:(DE-He78)bff9e3e3d86865d2b0836bb8f3ce98f3 |
910 | 1 | _ | |a Deutsches Krebsforschungszentrum |0 I:(DE-588b)2036810-0 |k DKFZ |b 20 |6 P:(DE-He78)e84b3187ddd3529f884082e30f228c66 |
910 | 1 | _ | |a Deutsches Krebsforschungszentrum |0 I:(DE-588b)2036810-0 |k DKFZ |b 21 |6 P:(DE-He78)261d2b84aded878003e6e35d18113831 |
910 | 1 | _ | |a Deutsches Krebsforschungszentrum |0 I:(DE-588b)2036810-0 |k DKFZ |b 22 |6 P:(DE-He78)fae1bf941c5fd76cf5356ecfa1243cc4 |
910 | 1 | _ | |a Deutsches Krebsforschungszentrum |0 I:(DE-588b)2036810-0 |k DKFZ |b 27 |6 P:(DE-He78)5e3d4de4b59cd068969e101847794267 |
910 | 1 | _ | |a Deutsches Krebsforschungszentrum |0 I:(DE-588b)2036810-0 |k DKFZ |b 40 |6 P:(DE-He78)143af26de9d57bf624771616318aaf7c |
910 | 1 | _ | |a Deutsches Krebsforschungszentrum |0 I:(DE-588b)2036810-0 |k DKFZ |b 49 |6 P:(DE-He78)a8a10626a848d31e70cfd96a133cc144 |
910 | 1 | _ | |a Deutsches Krebsforschungszentrum |0 I:(DE-588b)2036810-0 |k DKFZ |b 51 |6 P:(DE-He78)a1f4b408b9155beb2a8f7cba4d04fe88 |
910 | 1 | _ | |a Deutsches Krebsforschungszentrum |0 I:(DE-588b)2036810-0 |k DKFZ |b 52 |6 P:(DE-He78)f746aa965c4e1af518b016de3aaff5d9 |
910 | 1 | _ | |a Deutsches Krebsforschungszentrum |0 I:(DE-588b)2036810-0 |k DKFZ |b 53 |6 P:(DE-He78)551bb92841f634070997aa168d818492 |
913 | 1 | _ | |a DE-HGF |b Gesundheit |l Krebsforschung |1 G:(DE-HGF)POF4-310 |0 G:(DE-HGF)POF4-312 |3 G:(DE-HGF)POF4 |2 G:(DE-HGF)POF4-300 |4 G:(DE-HGF)POF |v Funktionelle und strukturelle Genomforschung |x 0 |
914 | 1 | _ | |y 2023 |
915 | _ | _ | |a DEAL Nature |0 StatID:(DE-HGF)3003 |2 StatID |d 2022-11-17 |w ger |
915 | _ | _ | |a DBCoverage |0 StatID:(DE-HGF)1190 |2 StatID |b Biological Abstracts |d 2022-11-17 |
915 | _ | _ | |a WoS |0 StatID:(DE-HGF)0113 |2 StatID |b Science Citation Index Expanded |d 2022-11-17 |
915 | _ | _ | |a DBCoverage |0 StatID:(DE-HGF)0160 |2 StatID |b Essential Science Indicators |d 2022-11-17 |
915 | _ | _ | |a Nationallizenz |0 StatID:(DE-HGF)0420 |2 StatID |d 2023-08-29 |w ger |
915 | _ | _ | |a DBCoverage |0 StatID:(DE-HGF)0300 |2 StatID |b Medline |d 2023-08-29 |
915 | _ | _ | |a DBCoverage |0 StatID:(DE-HGF)0199 |2 StatID |b Clarivate Analytics Master Journal List |d 2023-08-29 |
915 | _ | _ | |a DBCoverage |0 StatID:(DE-HGF)1050 |2 StatID |b BIOSIS Previews |d 2023-08-29 |
915 | _ | _ | |a DBCoverage |0 StatID:(DE-HGF)0150 |2 StatID |b Web of Science Core Collection |d 2023-08-29 |
915 | _ | _ | |a DBCoverage |0 StatID:(DE-HGF)1030 |2 StatID |b Current Contents - Life Sciences |d 2023-08-29 |
915 | _ | _ | |a DBCoverage |0 StatID:(DE-HGF)1110 |2 StatID |b Current Contents - Clinical Medicine |d 2023-08-29 |
915 | _ | _ | |a JCR |0 StatID:(DE-HGF)0100 |2 StatID |b NAT MED : 2022 |d 2023-08-29 |
915 | _ | _ | |a DBCoverage |0 StatID:(DE-HGF)0200 |2 StatID |b SCOPUS |d 2023-08-29 |
915 | _ | _ | |a DBCoverage |0 StatID:(DE-HGF)0600 |2 StatID |b Ebsco Academic Search |d 2023-08-29 |
915 | _ | _ | |a Peer Review |0 StatID:(DE-HGF)0030 |2 StatID |b ASC |d 2023-08-29 |
915 | _ | _ | |a IF >= 80 |0 StatID:(DE-HGF)9980 |2 StatID |b NAT MED : 2022 |d 2023-08-29 |
920 | 2 | _ | |0 I:(DE-He78)B300-20160331 |k B300 |l KKE Neuropathologie |x 0 |
920 | 2 | _ | |0 I:(DE-He78)B062-20160331 |k B062 |l B062 Pädiatrische Neuroonkologie |x 1 |
920 | 2 | _ | |0 I:(DE-He78)B360-20160331 |k B360 |l Pädiatische Gliomforschung |x 2 |
920 | 1 | _ | |0 I:(DE-He78)B360-20160331 |k B360 |l Pädiatische Gliomforschung |x 0 |
920 | 1 | _ | |0 I:(DE-He78)BE01-20160331 |k BE01 |l DKTK Koordinierungsstelle Berlin |x 1 |
920 | 1 | _ | |0 I:(DE-He78)B300-20160331 |k B300 |l KKE Neuropathologie |x 2 |
920 | 1 | _ | |0 I:(DE-He78)B062-20160331 |k B062 |l B062 Pädiatrische Neuroonkologie |x 3 |
920 | 1 | _ | |0 I:(DE-He78)W610-20160331 |k W610 |l W610 Core Facility Omics IT |x 4 |
920 | 1 | _ | |0 I:(DE-He78)B310-20160331 |k B310 |l KKE Pädiatrische Onkologie |x 5 |
920 | 1 | _ | |0 I:(DE-He78)HD01-20160331 |k HD01 |l DKTK HD zentral |x 6 |
920 | 0 | _ | |0 I:(DE-He78)B360-20160331 |k B360 |l Pädiatische Gliomforschung |x 0 |
980 | _ | _ | |a journal |
980 | _ | _ | |a VDB |
980 | _ | _ | |a I:(DE-He78)B360-20160331 |
980 | _ | _ | |a I:(DE-He78)BE01-20160331 |
980 | _ | _ | |a I:(DE-He78)B300-20160331 |
980 | _ | _ | |a I:(DE-He78)B062-20160331 |
980 | _ | _ | |a I:(DE-He78)W610-20160331 |
980 | _ | _ | |a I:(DE-He78)B310-20160331 |
980 | _ | _ | |a I:(DE-He78)HD01-20160331 |
980 | _ | _ | |a UNRESTRICTED |
Library | Collection | CLSMajor | CLSMinor | Language | Author |
---|