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@ARTICLE{AbuSammour:275219,
author = {D. Abu Sammour and J. L. Cairns and T. Boskamp and C.
Marsching and T. Kessler$^*$ and C. Ramallo Guevara and V.
Panitz$^*$ and A. Sadik$^*$ and J. Cordes and S. Schmidt and
S. A. Mohammed and M. F. Rittel and M. Friedrich$^*$ and M.
Platten$^*$ and I. Wolf and A. von Deimling$^*$ and C.
Opitz$^*$ and W. Wick$^*$ and C. Hopf},
title = {{S}patial probabilistic mapping of metabolite ensembles in
mass spectrometry imaging.},
journal = {Nature Communications},
volume = {14},
number = {1},
issn = {2041-1723},
address = {[London]},
publisher = {Nature Publishing Group UK},
reportid = {DKFZ-2023-00677},
pages = {1823},
year = {2023},
abstract = {Mass spectrometry imaging vows to enable simultaneous
spatially resolved investigation of hundreds of metabolites
in tissues, but it primarily relies on traditional ion
images for non-data-driven metabolite visualization and
analysis. The rendering and interpretation of ion images
neither considers nonlinearities in the resolving power of
mass spectrometers nor does it yet evaluate the statistical
significance of differential spatial metabolite abundance.
Here, we outline the computational framework moleculaR (
https://github.com/CeMOS-Mannheim/moleculaR ) that is
expected to improve signal reliability by data-dependent
Gaussian-weighting of ion intensities and that introduces
probabilistic molecular mapping of statistically significant
nonrandom patterns of relative spatial abundance of
metabolites-of-interest in tissue. moleculaR also enables
cross-tissue statistical comparisons and collective
molecular projections of entire biomolecular ensembles
followed by their spatial statistical significance
evaluation on a single tissue plane. It thereby fosters the
spatially resolved investigation of ion milieus, lipid
remodeling pathways, or complex scores like the adenylate
energy charge within the same image.},
cin = {B320 / HD01 / B350 / D170 / B300},
ddc = {500},
cid = {I:(DE-He78)B320-20160331 / I:(DE-He78)HD01-20160331 /
I:(DE-He78)B350-20160331 / I:(DE-He78)D170-20160331 /
I:(DE-He78)B300-20160331},
pnm = {312 - Funktionelle und strukturelle Genomforschung
(POF4-312)},
pid = {G:(DE-HGF)POF4-312},
typ = {PUB:(DE-HGF)16},
pubmed = {pmid:37005414},
doi = {10.1038/s41467-023-37394-z},
url = {https://inrepo02.dkfz.de/record/275219},
}