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@ARTICLE{Schmidt:290237,
author = {C. Schmidt$^*$ and T. Boissonnet and J. Dohle and K.
Bernhardt and E. Ferrando-May$^*$ and T. Wernet and R.
Nitschke and S. Kunis and S. Weidtkamp-Peters},
title = {{A} practical guide to bioimaging research data management
in core facilities.},
journal = {Journal of microscopy},
volume = {294},
number = {3},
issn = {0022-2720},
address = {Oxford [u.a.]},
publisher = {Wiley-Blackwell},
reportid = {DKFZ-2024-01053},
pages = {350-371},
year = {2024},
note = {#EA:W650# / 2024 Jun;294(3):350-371},
abstract = {Bioimage data are generated in diverse research fields
throughout the life and biomedical sciences. Its potential
for advancing scientific progress via modern, data-driven
discovery approaches reaches beyond disciplinary borders. To
fully exploit this potential, it is necessary to make
bioimaging data, in general, multidimensional microscopy
images and image series, FAIR, that is, findable,
accessible, interoperable and reusable. These FAIR
principles for research data management are now widely
accepted in the scientific community and have been adopted
by funding agencies, policymakers and publishers. To remain
competitive and at the forefront of research, implementing
the FAIR principles into daily routines is an essential but
challenging task for researchers and research
infrastructures. Imaging core facilities, well-established
providers of access to imaging equipment and expertise, are
in an excellent position to lead this transformation in
bioimaging research data management. They are positioned at
the intersection of research groups, IT infrastructure
providers, the institution´s administration, and microscope
vendors. In the frame of German BioImaging - Society for
Microscopy and Image Analysis (GerBI-GMB),
cross-institutional working groups and third-party funded
projects were initiated in recent years to advance the
bioimaging community's capability and capacity for FAIR
bioimage data management. Here, we provide an
imaging-core-facility-centric perspective outlining the
experience and current strategies in Germany to facilitate
the practical adoption of the FAIR principles closely
aligned with the international bioimaging community. We
highlight which tools and services are ready to be
implemented and what the future directions for FAIR bioimage
data have to offer.},
subtyp = {Review Article},
keywords = {FAIR (Other) / OMERO (Other) / bioimaging (Other) / data
stewardship (Other) / research data management (Other)},
cin = {W650},
ddc = {570},
cid = {I:(DE-He78)W650-20160331},
pnm = {315 - Bildgebung und Radioonkologie (POF4-315)},
pid = {G:(DE-HGF)POF4-315},
typ = {PUB:(DE-HGF)16},
pubmed = {pmid:38752662},
doi = {10.1111/jmi.13317},
url = {https://inrepo02.dkfz.de/record/290237},
}