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@ARTICLE{Lazarewicz:294334,
author = {N. Lazarewicz and G. Le Dez and R. Cerjani and L. Runeshaw
and M. Meurer and M. Knop$^*$ and R. Wysocki and G. Rabut},
title = {{A}ccurate and sensitive interactome profiling using a
quantitative protein-fragment complementation assay.},
journal = {Cell reports / Methods},
volume = {4},
number = {10},
issn = {2667-2375},
address = {Cambridge, MA},
publisher = {Cell Press},
reportid = {DKFZ-2024-02167},
pages = {100880},
year = {2024},
note = {DKFZ-ZMBH Alliance},
abstract = {An accurate description of protein-protein interaction
(PPI) networks is key to understanding the molecular
mechanisms underlying cellular systems. Here, we constructed
genome-wide libraries of yeast strains to systematically
probe protein-protein interactions using NanoLuc Binary
Technology (NanoBiT), a quantitative protein-fragment
complementation assay (PCA) based on the NanoLuc luciferase.
By investigating an array of well-documented PPIs as well as
the interactome of four proteins with varying levels of
characterization-including the well-studied
nonsense-mediated mRNA decay (NMD) regulator Upf1 and the
SCF complex subunits Cdc53 and Met30-we demonstrate that
ratiometric NanoBiT measurements enable highly precise and
sensitive mapping of PPIs. This work provides a foundation
for employing NanoBiT in the assembly of more comprehensive
and accurate protein interaction maps as well as in their
functional investigation.},
keywords = {Protein Interaction Mapping: methods / Saccharomyces
cerevisiae: genetics / Saccharomyces cerevisiae: metabolism
/ Protein Interaction Maps / Saccharomyces cerevisiae
Proteins: metabolism / Saccharomyces cerevisiae Proteins:
genetics / Luciferases: genetics / Luciferases: metabolism /
CP: Systems biology (Other) / Cdc53 (Other) / Irc20 (Other)
/ Met30 (Other) / Nam7 (Other) / NanoBiT (Other) /
Saccharomyces cerevisiae (Other) / Upf1 (Other) / budding
yeast (Other) / interactome (Other) / protein-protein
interaction (Other) / Saccharomyces cerevisiae Proteins (NLM
Chemicals) / Luciferases (NLM Chemicals)},
cin = {A260},
ddc = {610},
cid = {I:(DE-He78)A260-20160331},
pnm = {311 - Zellbiologie und Tumorbiologie (POF4-311)},
pid = {G:(DE-HGF)POF4-311},
typ = {PUB:(DE-HGF)16},
pubmed = {pmid:39437715},
doi = {10.1016/j.crmeth.2024.100880},
url = {https://inrepo02.dkfz.de/record/294334},
}