000303392 001__ 303392 000303392 005__ 20250807114415.0 000303392 0247_ $$2doi$$a10.1136/gutjnl-2024-332105 000303392 0247_ $$2pmid$$apmid:40764061 000303392 0247_ $$2ISSN$$a0017-5749 000303392 0247_ $$2ISSN$$a1468-3288 000303392 037__ $$aDKFZ-2025-01632 000303392 041__ $$aEnglish 000303392 082__ $$a610 000303392 1001_ $$aSuo, Yuan$$b0 000303392 245__ $$aSpatial single-cell omics: new insights into liver diseases. 000303392 260__ $$aLondon$$bBMJ Publishing Group$$c2025 000303392 3367_ $$2DRIVER$$aarticle 000303392 3367_ $$2DataCite$$aOutput Types/Journal article 000303392 3367_ $$0PUB:(DE-HGF)16$$2PUB:(DE-HGF)$$aJournal Article$$bjournal$$mjournal$$s1754483970_17601$$xReview Article 000303392 3367_ $$2BibTeX$$aARTICLE 000303392 3367_ $$2ORCID$$aJOURNAL_ARTICLE 000303392 3367_ $$00$$2EndNote$$aJournal Article 000303392 500__ $$aepub 000303392 520__ $$aThe liver is a highly multifunctional organ that can perform many metabolic and immunological functions due to a highly complex spatially organised microarchitecture that is disturbed in many liver diseases. Recent methodological advances in spatial omics technologies enable the comprehensive study of the intrahepatic proteome, transcriptome and metabolome at near single-cell and subcellular resolution. The spatial resolution adds an additional dimension to our understanding of the liver, with the potential to revolutionise our insights into the cellular and molecular mechanisms underlying liver physiology and their dysregulation in liver disease. The identification of spatial niches and interactions is empowered by advanced bioinformatics approaches facilitating spatial cellular and network-level analysis and providing novel opportunities for clinical translation. A recent example in immuno-oncology is the use of spatial architecture-based immune classifications, which can improve patient stratification. In this review, we provide an overview of the current methodology and novel spatial insights into metabolic, infectious, immune-mediated, toxic and malign liver diseases and discuss perspectives for clinical translation. 000303392 536__ $$0G:(DE-HGF)POF4-899$$a899 - ohne Topic (POF4-899)$$cPOF4-899$$fPOF IV$$x0 000303392 588__ $$aDataset connected to CrossRef, PubMed, , Journals: inrepo02.dkfz.de 000303392 650_7 $$2Other$$aIMMUNOHISTOPATHOLOGY 000303392 650_7 $$2Other$$aLIVER 000303392 650_7 $$2Other$$aLIVER IMMUNOLOGY 000303392 650_7 $$2Other$$aMETABOLOMICS 000303392 650_7 $$2Other$$aPROTEOMICS 000303392 7001_ $$aThimme, Robert$$b1 000303392 7001_ $$00000-0003-2552-740X$$aBengsch, Bertram$$b2 000303392 773__ $$0PERI:(DE-600)1492637-4$$a10.1136/gutjnl-2024-332105$$gp. gutjnl-2024-332105 -$$pnn$$tGut$$vnn$$x0017-5749$$y2025 000303392 909CO $$ooai:inrepo02.dkfz.de:303392$$pVDB 000303392 9101_ $$0I:(DE-588b)2036810-0$$60000-0003-2552-740X$$aDeutsches Krebsforschungszentrum$$b2$$kDKFZ 000303392 9131_ $$0G:(DE-HGF)POF4-899$$1G:(DE-HGF)POF4-890$$2G:(DE-HGF)POF4-800$$3G:(DE-HGF)POF4$$4G:(DE-HGF)POF$$aDE-HGF$$bProgrammungebundene Forschung$$lohne Programm$$vohne Topic$$x0 000303392 9141_ $$y2025 000303392 915__ $$0StatID:(DE-HGF)0430$$2StatID$$aNational-Konsortium$$d2024-12-21$$wger 000303392 915__ $$0StatID:(DE-HGF)0200$$2StatID$$aDBCoverage$$bSCOPUS$$d2024-12-21 000303392 915__ $$0StatID:(DE-HGF)0300$$2StatID$$aDBCoverage$$bMedline$$d2024-12-21 000303392 915__ $$0StatID:(DE-HGF)0600$$2StatID$$aDBCoverage$$bEbsco Academic Search$$d2024-12-21 000303392 915__ $$0StatID:(DE-HGF)0030$$2StatID$$aPeer Review$$bASC$$d2024-12-21 000303392 915__ $$0StatID:(DE-HGF)0199$$2StatID$$aDBCoverage$$bClarivate Analytics Master Journal List$$d2024-12-21 000303392 915__ $$0StatID:(DE-HGF)1050$$2StatID$$aDBCoverage$$bBIOSIS Previews$$d2024-12-21 000303392 915__ $$0StatID:(DE-HGF)0160$$2StatID$$aDBCoverage$$bEssential Science Indicators$$d2024-12-21 000303392 915__ $$0StatID:(DE-HGF)1030$$2StatID$$aDBCoverage$$bCurrent Contents - Life Sciences$$d2024-12-21 000303392 915__ $$0StatID:(DE-HGF)1190$$2StatID$$aDBCoverage$$bBiological Abstracts$$d2024-12-21 000303392 915__ $$0StatID:(DE-HGF)1110$$2StatID$$aDBCoverage$$bCurrent Contents - Clinical Medicine$$d2024-12-21 000303392 915__ $$0StatID:(DE-HGF)0113$$2StatID$$aWoS$$bScience Citation Index Expanded$$d2024-12-21 000303392 915__ $$0StatID:(DE-HGF)0150$$2StatID$$aDBCoverage$$bWeb of Science Core Collection$$d2024-12-21 000303392 9201_ $$0I:(DE-He78)FR01-20160331$$kFR01$$lDKTK Koordinierungsstelle Freiburg$$x0 000303392 980__ $$ajournal 000303392 980__ $$aVDB 000303392 980__ $$aI:(DE-He78)FR01-20160331 000303392 980__ $$aUNRESTRICTED