Journal Article

DKFZ-2018-01667

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png MetaboDiff: an R package for differential metabolomic analysis.

Mock, A. (First author)DKFZ* ; Warta, R.DKFZ* ; Dettling, S.DKFZ* ; Brors, B.DKFZ* ; Jäger, D.DKFZ* ; Herold-Mende, C. (Last author)DKFZ*

2018
Oxford Univ. Press Oxford

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Please use a persistent id in citations: doi:10.1093/bioinformatics/bty344

Abstract: Comparative metabolomics comes of age through commercial vendors offering metabolomics for translational researchers outside the mass spectrometry field. The MetaboDiff packages aims to provide a low-level entry to differential metabolomic analysis with R by starting off with the table of metabolite measurements. As a key functionality, MetaboDiffs offers the exploration of sample traits in a data-derived metabolic correlation network.The MetaboDiff R package is platform-independent, available at http://github.com/andreasmock/MetaboDiff/ and released under the MIT licence. The package documentation comprises a step-by-step markdown tutorial.Supplementary data are available at Bioinformatics online.

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Contributing Institute(s):

1. Angewandte Bioinformatik (G200)
2. DKTK Heidelberg (L101)

Research Program(s):

1. 317 - Translational cancer research (POF3-317) (POF3-317)

Appears in the scientific report 2018

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Database coverage:
; BIOSIS Previews ; Clarivate Analytics Master Journal List ; Current Contents - Life Sciences ; Ebsco Academic Search ; IF >= 5 ; JCR ; NCBI Molecular Biology Database ; Nationallizenz ; PubMed Central ; SCOPUS ; Science Citation Index ; Science Citation Index Expanded ; Web of Science Core Collection

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