D191

Recent Publications

All known publications ...
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http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Book/Journal Article Gómez-Zepeda, D. (First author)DKFZ* ; Beyrle, J.DKFZ* ; Preikschat, A. ; Declercq, A. ; Chen, Y.DKFZ* ; Gabriels, R. ; Martens, L. ; Distler, U. ; Tenzer, S. (Last author)DKFZ*
High-Coverage Immunopeptidomics Using timsTOF Mass Spectrometers with Thunder-DDA-PASEF Boosted by MS2Rescore.
Methods in molecular biology 2980, 115-156 (2026) [DOI:10.1007/978-1-0716-4832-2_5]2026   BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Gabele, A. ; Cihan, M. ; Sprang, M. ; Klein, M. ; Nurbekova, A. ; Romaniuk, K. ; Lemmermann, N. ; Tenzer, S.DKFZ* ; Andrade-Navarro, M. A. ; Bopp, T. ; Distler, U.
Protocol for mapping murine transcription factor interactomes and composite motifs combining affinity purification mass spectrometry and ChIP-seq.
STAR Protocols 6(4), 104184 (2025) [10.1016/j.xpro.2025.104184]2025   BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Distler, U. ; Yoo, H. B. ; Kardell, O. ; Hein, D. ; Sielaff, M. ; Scherer, M. ; Jozefowicz, A. M. ; Leps, C. ; Gómez-Zepeda, D.DKFZ* ; von Toerne, C. ; Merl-Pham, J. ; Barth, T. K. ; Tüshaus, J. ; Giesbertz, P. ; Müller, T.DKFZ* ; Kliewer, G.DKFZ* ; Aljakouch, K.DKFZ* ; Helm, B.DKFZ* ; Unger, H.DKFZ* ; Frey, D.DKFZ* ; Helm, D.DKFZ* ; Schwarzmüller, L.DKFZ* ; Popp, O. ; Qin, D. ; Wudy, S. I. ; Sinn, L. R. ; Mergner, J. ; Ludwig, C. ; Imhof, A. ; Kuster, B. ; Lichtenthaler, S. F. ; Krijgsveld, J.DKFZ* ; Klingmüller, U.DKFZ* ; Mertins, P. ; Coscia, F. ; Ralser, M. ; Mülleder, M. ; Hauck, S. M. ; Tenzer, S. (Last author)DKFZ*
Multicenter evaluation of label-free quantification in human plasma on a high dynamic range benchmark set.
Nature Communications 16(1), 8774 (2025) [10.1038/s41467-025-64501-z]2025     Fulltext by Pubmed Central BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Quiroz, J. N. ; Sielaff, M. ; Kondrateva, D. ; Boukhallouk, F. ; Godoy, G. J. ; Molina, C. R. ; Moonen, B. ; Motran, C. C. ; Bogie, J. ; Luján, H. D. ; Tenzer, S.DKFZ* ; Sparwasser, T. ; Berod, L.
TLR9-Driven S-Palmitoylation in Dendritic Cells Reveals Immune and Metabolic Protein Targets.
European journal of immunology 55(8), e70039 (2025) [10.1002/eji.70039]2025     Fulltext by Pubmed Central BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Bündgen, G. ; Ulges, A. ; Pietruschka, J. ; Truong-Andrievici, N. ; Klein, M. ; Romaniuk, K. ; Schmitt, F. ; Hagen, M. ; Seebass, J. G. ; Zezlina, L. ; Stein, L. ; Probst, H. C. ; Distler, U. ; Tenzer, S.DKFZ* ; Lohoff, M. ; Romero-Olmedo, A. J. ; Mei, H. ; Bohn, T. ; Delacher, M. ; Schmidlin, T. ; Gaida, M. M. ; Dikic, I. ; Imbusch, C.DKFZ* ; Schild, H. ; Bopp, T.DKFZ*
Polyamines regulate adaptive antitumor immunity by functional specialization of regulatory T cells.
Immunity 58(8), 2019-2034.e11 (2025) [10.1016/j.immuni.2025.07.007]2025   BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Zhang, L. ; Pouya, A. ; Kopetzky, J. ; Bitar, S. ; Wolf, C. ; Bello, F. D. ; Gómez-Zepeda, D.DKFZ* ; Tenzer, S.DKFZ* ; Methner, A.
Increased BNIP3-mediated mitophagy attenuates GDAP1 loss of function - implications for Charcot-Marie-Tooth disease 4A.
Neurobiology of disease 213, 107019 (2025) [10.1016/j.nbd.2025.107019]2025   BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Teschner, D. ; Gómez-Zepeda, D.DKFZ* ; Łącki, M. K. ; Kemmer, T. ; Busch, A. ; Tenzer, S.DKFZ* ; Hildebrandt, A.
Rustims: An Open-Source Framework for Rapid Development and Processing of timsTOF Data-Dependent Acquisition Data.
Journal of proteome research 24(5), 2358-2368 (2025) [10.1021/acs.jproteome.4c00966]2025   BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Chen, Y. (First author)DKFZ* ; Preikschat, A. ; Arnold, A.DKFZ* ; Pecori, R.DKFZ* ; Gomez-Zepeda, D.DKFZ* ; Tenzer, S. (Last author)DKFZ*
Benchmarking Software for DDA-PASEF Immunopeptidomics.
Molecular & cellular proteomics nn, nn (2025) [10.1016/j.mcpro.2025.101492]2025   BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article (Letter) Mann, C. ; Ojak, G. ; Hyde, I. ; Beczinski, J. ; Pawlowski, J. ; Wegner, J. ; Becker, D. ; Stacey, M. ; Tenzer, S.DKFZ* ; Wittmann, M.
Epidermal IL-36 and CCL17 protein expression distinguish palmar eczema from palmar psoriasis.
The journal of investigative dermatology 145(12), 3188-3191.e1 (2025) [10.1016/j.jid.2025.04.040]2025   BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Gabele, A. ; Sprang, M. ; Cihan, M. ; Welzel, M. ; Nurbekova, A. ; Romaniuk, K. ; Dietzen, S. ; Klein, M. ; Bündgen, G. ; Emelianov, M. ; Harms, G. ; Rajalingam, K. ; Ziesmann, T. ; Pape, K. ; Wasser, B. ; Gomez-Zepeda, D.DKFZ* ; Braband, K. ; Delacher, M. ; Lemmermann, N. ; Bittner, S. ; Andrade-Navarro, M. A. ; Tenzer, S.DKFZ* ; Luck, K. ; Bopp, T. ; Distler, U.
Unveiling IRF4-steered regulation of context-dependent effector programs in CD4+ T cells under Th17- and Treg-skewing conditions.
Cell reports 44(3), 115407 (2025) [10.1016/j.celrep.2025.115407]2025   BibTeX | EndNote: XML, Text | RIS

All known publications ...
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