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@ARTICLE{Hill:294388,
author = {A. Hill$^*$ and K. Okonechnikov$^*$ and M. K. Herr$^*$ and
C. Thomas and S. Thongjuea$^*$ and M. Hasselblatt and A.
Patrizi$^*$},
title = {{S}ingle-nucleus {RNA}-seq dissection of choroid plexus
tumor cell heterogeneity.},
journal = {The EMBO journal},
volume = {43},
number = {24},
issn = {0261-4189},
address = {Hoboken, NJ [u.a.]},
publisher = {Wiley},
reportid = {DKFZ-2024-02217},
pages = {6766-6791},
year = {2024},
note = {#EA:A320#LA:A320# / 2024 Dec;43(24):6766-6791},
abstract = {The genomic, genetic and cellular events regulating the
onset, growth and survival of rare, choroid plexus neoplasms
remain poorly understood. Here, we examine the heterogeneity
of human choroid plexus tumors by single-nucleus
transcriptome analysis of 23,906 cells from four
disease-free choroid plexus and eleven choroid plexus
tumors. The resulting expression atlas profiles cellular and
transcriptional diversity, copy number alterations, and
cell-cell interaction networks in normal and cancerous
choroid plexus. In choroid plexus tumor epithelial cells, we
observe transcriptional changes that correlate with
genome-wide methylation profiles. We further characterize
tumor type-specific stromal microenvironments that include
altered macrophage and mesenchymal cell states, as well as
changes in extracellular matrix components. This first
single-cell dataset resource from such scarce samples should
be valuable for divising therapies against these
little-studied neoplasms.},
keywords = {Cerebrospinal Fluid (CSF) (Other) / Choroid Plexus Tumors
(Other) / Single Cell RNAseq (Other) / Tumor
Microenvironment (Other)},
cin = {A320 / B062 / HD01},
ddc = {570},
cid = {I:(DE-He78)A320-20160331 / I:(DE-He78)B062-20160331 /
I:(DE-He78)HD01-20160331},
pnm = {311 - Zellbiologie und Tumorbiologie (POF4-311)},
pid = {G:(DE-HGF)POF4-311},
typ = {PUB:(DE-HGF)16},
pubmed = {pmid:39482394},
doi = {10.1038/s44318-024-00283-2},
url = {https://inrepo02.dkfz.de/record/294388},
}