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Recent Publications

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http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Maass, K. (First author)DKFZ* ; Puranachot, P. (First author)DKFZ* ; Volz, S.DKFZ* ; Schad, P.DKFZ* ; Finster, A.DKFZ* ; Fischer, T. T.DKFZ* ; Jones, B. C.DKFZ* ; Schramm, K.DKFZ* ; Henneken, S.DKFZ* ; Simon, N.DKFZ* ; Montigel, S. H.DKFZ* ; Wedig, T.DKFZ* ; Schwarz, N.DKFZ* ; Zuliani, C.DKFZ* ; Fiesel, P.DKFZ* ; Previti, C.DKFZ* ; Balasubramanian, G.DKFZ* ; Iser, F. ; Meyer, J.DKFZ* ; van Tilburg, C. M.DKFZ* ; Milde, T.DKFZ* ; Witt, O.DKFZ* ; Rossi, C. ; Sparber-Sauer, M. ; Zimmermann, S. ; Lehrnbecher, T. ; Lauten, M. ; Sill, M.DKFZ* ; Jäger, N.DKFZ* ; Autry, R. J.DKFZ* ; Northcott, P. A. ; Sahm, F.DKFZ* ; Jones, D. T. W.DKFZ* ; Pfister, S. M.DKFZ* ; Brors, B. (Last author)DKFZ* ; Pajtler, K. (Last author)DKFZ*
Circulating tumor DNA precision oncology enables effective and sensitive molecular diagnostics and actionable target detection in pediatric solid tumors - the INFORM experience.
Genome medicine 18(1), 112 (2026) [10.1186/s13073-026-01737-4]2026     Fulltext by Pubmed Central BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Federico, A. (First author)DKFZ* ; Gopisetty, A. (First author)DKFZ* ; Surdez, D. ; et al
The ITCC-P4 PDX Platform Enables Preclinical Testing of Pediatric Cancers.
Cancer research nn, nn (2026) [10.1158/0008-5472.CAN-25-5295]2026   BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Schneider-Lunitz, V. ; Kensche, P. (First author)DKFZ* ; Kraatz, L. ; Strubel, P. ; Borufka, S.DKFZ* ; Parala, G.DKFZ* ; Kanitz, A. ; Eils, R. ; Buchhalter, I.DKFZ* ; Twardziok, S. O.
Managing Workflow Executions with WESkit.
Bioinformatics 42(3), btag091 (2026) [10.1093/bioinformatics/btag091]2026     Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article (Erratum/Correction) Li, T.-F. ; Rothhaar, P. ; Lang, A. ; Grünvogel, O. ; Colasanti, O. ; Ugarte, S. M. O. ; Traut, J. ; Piras, A. ; Acosta-Rivero, N. ; Goncalves Magalhaes, V.DKFZ* ; Springer, E. ; Betz, A. ; Huang, H.-E. ; Park, J.DKFZ* ; Qiu, R. ; Gnouamozi, G. E. ; Mehnert, A.-K. ; Dao Thi, V. L. ; Urban, S. ; Muckenthaler, M. ; Schlesner, M.DKFZ* ; Wohlleber, D. ; Binder, M.DKFZ* ; Bartenschlager, R.DKFZ* ; Pichlmair, A. ; Lohmann, V.
Correction: RBM39 shapes innate immunity by controlling expression of key factors of the interferon response
Frontiers in immunology 17, 1782019 (2026) [10.3389/fimmu.2026.1782019]2026   BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article (Review Article) Hartmann, M. (First author)DKFZ* ; Schönung, M. (First author)DKFZ* ; Rajak, J. ; Maurer, V.DKFZ* ; Hai, L.DKFZ* ; Bauer, K.DKFZ* ; Hakobyan, M.DKFZ* ; Stäble, S.DKFZ* ; Langstein, J.DKFZ* ; Jardine, L. ; Roelz, R. ; Bohler, S. ; Khabirova, E. ; Maag, A.-H. ; Vonficht, D.DKFZ* ; Lebrecht, D. ; Bernt, K. M. ; Tan, K. ; Chen, C. ; Alikarami, F. ; Meyer, J. ; Wang, J. ; Boch, T. ; Flore, N. V.DKFZ* ; Lutsik, P.DKFZ* ; Milsom, M.DKFZ* ; Raffel, S. ; Buske, C. ; Haas, S. ; Haniffa, M. ; Mallm, J.-P.DKFZ* ; Behjati, S. ; Bonder, M. J.DKFZ* ; Fröhling, S.DKFZ* ; Stieglitz, E. ; Niemeyer, C. M. ; Hey, J. (Last author)DKFZ* ; Flotho, C.DKFZ* ; Plass, C. (Last author)DKFZ* ; Erlacher, M.DKFZ* ; Schlesner, M. (Last author)DKFZ* ; Lipka, D. (Last author)DKFZ*
Molecular Plasticity Results in Oncofetal Reprogramming and Therapeutic Vulnerabilities in Juvenile Myelomonocytic Leukemia.
Blood cancer discovery 7(2), 306-330 (2026) [10.1158/2643-3230.BCD-25-0246]2026     Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Mauer, K. ; Iyappan, A. ; Parker, S.DKFZ* ; Sürün, B. ; Tremper, G.DKFZ* ; Menges, P.DKFZ* ; Kuchenbecker, L. ; Kirli, K.DKFZ* ; Schultze, J. L. ; Nahnsen, S. ; Ulas, T.
Semantic alignment of the German Human Genome-Phenome Archive metadata model in Europe’s genomics field
Scientific data 13(1), 242 (2026) [10.1038/s41597-026-06575-y]2026   BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article ElHarouni, D. (First author)DKFZ* ; Hernansaiz-Ballesteros, R. ; Peterziel, H.DKFZ* ; Balasubramanian, G.DKFZ* ; Previti, C.DKFZ* ; Schramm, K.DKFZ* ; Blattner-Johnson, M.DKFZ* ; Kabbe, R.DKFZ* ; Jones, B.DKFZ* ; Oppermann, S.DKFZ* ; Jones, D.DKFZ* ; Pfister, S.DKFZ* ; Witt, O.DKFZ* ; Saez-Rodriguez, J. ; Oehme, I.DKFZ* ; Jäger, N. (Last author)DKFZ* ; Schlesner, M.
Integrative Multiomics and Drug Sensitivity Profiling Reveal Potential Biomarkers and Therapeutic Strategies in Pediatric Solid Tumors.
Cancer research 86(3), 773-784 (2026) [10.1158/0008-5472.CAN-24-1938]2026     Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Sill, M. (First author)DKFZ* ; Schrimpf, D.DKFZ* ; Patel, A.DKFZ* ; et al
Advancing CNS tumor diagnostics with expanded DNA methylation-based classification.
Cancer cell 44(2), 340-354.e2 (2026) [10.1016/j.ccell.2025.11.002]2026     Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Lin, Y.-Y. (First author)DKFZ* ; Breuer, K.DKFZ* ; Weichenhan, D.DKFZ* ; Lafrenz, P.DKFZ* ; Sarnataro, A. ; Wilk, A.DKFZ* ; Chepeleva, M. ; Mücke, O.DKFZ* ; Schönung, M.DKFZ* ; Petermann, F.DKFZ* ; Kensche, P. R.DKFZ* ; Weiser, L.DKFZ* ; Thommen, F.DKFZ* ; Giacomelli, G. ; Nordstroem, K. ; Gonzalez-Avalos, E. ; Merkel, A. ; Kretzmer, H. ; Fischer, J. ; Krämer, S.DKFZ* ; Iskar, M.DKFZ* ; Wolf, S.DKFZ* ; Buchhalter, I.DKFZ* ; Esteller, M. ; Lawerenz, C. ; Twardziok, S. ; Zapatka, M.DKFZ* ; Hovestadt, V. ; Schlesner, M. ; Schulz, M. H. ; Hoffmann, S. ; Gerhäuser, C.DKFZ* ; Walter, J. ; Hartmann, M.DKFZ* ; Lipka, D.DKFZ* ; Assenov, Y. ; Bock, C. ; Plass, C.DKFZ* ; Toth, R. (Last author)DKFZ* ; Lutsik, P. (Last author)DKFZ*
Pipeline Olympics: continuable benchmarking of computational workflows for DNA methylation sequencing data against an experimental gold standard.
Nucleic acids research 53(19), gkaf970 (2025) [10.1093/nar/gkaf970]2025     Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Pfaff, E. (First author)DKFZ* ; Schramm, K.DKFZ* ; Blattner-Johnson, M.DKFZ* ; Jones, B. C.DKFZ* ; Stark, S.DKFZ* ; Balasubramanian, G. P.DKFZ* ; Previti, C.DKFZ* ; Autry, R. J.DKFZ* ; Fiesel, P.DKFZ* ; Sahm, F.DKFZ* ; Reuss, D.DKFZ* ; von Deimling, A.DKFZ* ; van Tilburg, C. M.DKFZ* ; Pajtler, K. W.DKFZ* ; Milde, T.DKFZ* ; Dirksen, U.DKFZ* ; Kramm, C. M. ; von Bueren, A. O. ; Hutter, C. ; de Wilde, B. ; Molenaar, J. ; Gerber, N. U. ; Lohi, O. ; Munthe-Kaas, M. C. ; Georgantzi, K. ; Kazanowska, B. ; Zápotocký, M. ; Kattamis, A. ; Filippidou, M. ; Fried, I. ; Pfister, S. M.DKFZ* ; Witt, O.DKFZ* ; Jones, D. (Last author)DKFZ*
Molecular characterization and clinical features of diffuse midline glioma in the pediatric precision oncology registry INFORM.
Acta neuropathologica 150(1), 42 (2025) [10.1007/s00401-025-02945-9]2025     Files  Fulltext by Pubmed Central BibTeX | EndNote: XML, Text | RIS

All known publications ...
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